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	<title>Lab Rat or Button Monkey? &#187; Chemistry</title>
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	<link>http://blog.biomedicalscience.org.uk</link>
	<description>Under the white coat</description>
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		<title>Clinical Chemistry Podcast: Vitamin D with Dr Graham Beastall</title>
		<link>http://blog.biomedicalscience.org.uk/2009/06/28/clinical-chemistry-podcast-vitamin-d-with-dr-graham-beastall/</link>
		<comments>http://blog.biomedicalscience.org.uk/2009/06/28/clinical-chemistry-podcast-vitamin-d-with-dr-graham-beastall/#comments</comments>
		<pubDate>Sun, 28 Jun 2009 16:52:04 +0000</pubDate>
		<dc:creator>dapo</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[CPD]]></category>
		<category><![CDATA[Good sites]]></category>
		<category><![CDATA[Clinical Chemistry]]></category>
		<category><![CDATA[Graham Beastall]]></category>
		<category><![CDATA[Podcast]]></category>
		<category><![CDATA[Vitamin D]]></category>

		<guid isPermaLink="false">http://blog.biomedicalscience.org.uk/?p=119</guid>
		<description><![CDATA[I have finally got some time to write a review for the Vitamin D podcast from  Clinical Chemistry. The interview isn&#8217;t too long and does not go into great technical depth but is a great listen and I certainly learned a few things from listening to it.  I knew that there are two different sources [...]]]></description>
			<content:encoded><![CDATA[<p>I have finally got some time to write a review for the <a href="http://media.aacc.org/CCJPodcasts/060309Beastall.mp3">Vitamin D</a> podcast from  <a href="http://www.clinchem.org">Clinical Chemistry</a>.</p>
<p>The interview isn&#8217;t too long and does not go into great technical depth but is a great listen and I certainly learned a few things from listening to it.  I knew that there are two different sources of vitamin D, diet and production by the body due to exposure to sunlight.  I didn&#8217;t realise that animal and sunlight derived vitamin D is Vitamin D3 and invertebrate and plant derived vitamin d is Vitamin D2.</p>
<p><span id="more-119"></span></p>
<p>My colleagues have discussed the numerous conditions linked to Vitamin D other than the traditional role in calcium metabolism.  It seems that currently the mechanism of protection provided by Vitamin D is uncertain but there are several possible avenues being investigated.</p>
<p>Discussion touched upon the slightly problematic reference ranges.  The traditional reference range has been defined by analysis of a healthy population for the analyte and find the standard deviation and the mean.  The reference range is from -2 SD below the mean to +2 SD above mean. Or in other words, its the range which covers 95% of the popultation.  With Vitamin D, this produces a  limit of 25 nmol/L.  Recent evidence has suggested that people with a &#8220;normal&#8221; Vitamin D level are still risk of a variety of conditions.  There is evidence to suggest that limit 75 nmol/L provides protection against the various conditions that Vitamin has been linked with.  Like cholesterol, it seems that the reference range for Vitamin is based on health benefits rather than the traditional route.</p>
<p>One of the problems discussed regarding the analysis of Vitamin D is the link of standardisation and lack of agreed calibration material.  Numerous labs currently measure Vitamin D with an immunassay.  This approach has difficulty is differentiating between Vitamin D2 and Vitamin D3.  Techniques like liquid chromatography linked to a tandem mass spectrometer can provide measurement of Vitamin D2 and D3 but the equipment requires a considerable capital outlay and requires a high level of technical expertise.</p>
<p>As it stands, Vitamin D is being implicated as having a protective role in a considerable number of conditions with more probably yet to be discovered.  There are considerable hurdles to clear in the analysis of Vitamin D but is certain that Vitamin has a considerable role outside of its traditional role in calcium metabolism.</p>
<p>This was a really worth while podcast to listen to.  I have listened to two episodes and I will write these up soon.</p>
<p>Audio: <a href="http://media.aacc.org/CCJPodcasts/060309Beastall.mp3">http://media.aacc.org/CCJPodcasts/060309Beastall.mp3</a></p>
<p>Transcript: <a href="http://www.aacc.org/events/podcast/Documents/060309Beastall.pdf">http://www.aacc.org/events/podcast/Documents/060309Beastall.pdf</a></p>
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		</item>
		<item>
		<title>Training</title>
		<link>http://blog.biomedicalscience.org.uk/2009/06/27/training/</link>
		<comments>http://blog.biomedicalscience.org.uk/2009/06/27/training/#comments</comments>
		<pubDate>Sat, 27 Jun 2009 08:51:04 +0000</pubDate>
		<dc:creator>dapo</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[CPD]]></category>
		<category><![CDATA[training]]></category>

		<guid isPermaLink="false">http://blog.biomedicalscience.org.uk/2009/06/27/training/</guid>
		<description><![CDATA[I have been given some dedicated time at work to work as a Training Officer. I am really looking forward to seeing what I can do with the time and how I can shape the training of people within the laboratory. Watch this space for developments&#8230;..]]></description>
			<content:encoded><![CDATA[<p>I have been given some dedicated time at work to work as a Training Officer.  I am really looking forward to seeing what I can do with the time and how I can shape the training of people within the laboratory.  Watch this space for developments&#8230;..</p>
]]></content:encoded>
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		<item>
		<title>New Method presentation</title>
		<link>http://blog.biomedicalscience.org.uk/2008/11/19/new-method-presentation/</link>
		<comments>http://blog.biomedicalscience.org.uk/2008/11/19/new-method-presentation/#comments</comments>
		<pubDate>Wed, 19 Nov 2008 12:54:26 +0000</pubDate>
		<dc:creator>dapo</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[ODF]]></category>
		<category><![CDATA[presentation]]></category>

		<guid isPermaLink="false">http://blog.biomedicalscience.org.uk/?p=78</guid>
		<description><![CDATA[This is the presentation file I promised earlier.  I hope to write up some notes to accompany the presentation as there was extra detail in more talk that was absent from the slides.  I always feel that a presentation ends up boring if the talk is just someone reading slide content. presentation Note: The file [...]]]></description>
			<content:encoded><![CDATA[<p>This is the presentation file I promised earlier.  I hope to write up some notes to accompany the presentation as there was extra detail in more talk that was absent from the slides.  I always feel that a presentation ends up boring if the talk is just someone reading slide content.</p>
<p><a href="http://blog.biomedicalscience.org.uk/wp-content/uploads/2008/11/presentation.odp">presentation</a></p>
<p>Note: The file uses the Open Document Format.</p>
]]></content:encoded>
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		</item>
		<item>
		<title>Warning over blood-taking method</title>
		<link>http://blog.biomedicalscience.org.uk/2008/07/27/warning-over-blood-taking-method/</link>
		<comments>http://blog.biomedicalscience.org.uk/2008/07/27/warning-over-blood-taking-method/#comments</comments>
		<pubDate>Sun, 27 Jul 2008 13:58:48 +0000</pubDate>
		<dc:creator>dapo</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[Good sites]]></category>
		<category><![CDATA[ACB]]></category>
		<category><![CDATA[blood]]></category>
		<category><![CDATA[potassium]]></category>

		<guid isPermaLink="false">http://blog.biomedicalscience.org.uk/?p=57</guid>
		<description><![CDATA[http://news.bbc.co.uk/1/hi/health/7525932.stm]]></description>
			<content:encoded><![CDATA[<p><a href="http://news.bbc.co.uk/1/hi/health/7525932.stm">http://news.bbc.co.uk/1/hi/health/7525932.stm</a></p>
]]></content:encoded>
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		</item>
		<item>
		<title>Unusual Potassium result</title>
		<link>http://blog.biomedicalscience.org.uk/2007/06/02/unusual-potassium-result/</link>
		<comments>http://blog.biomedicalscience.org.uk/2007/06/02/unusual-potassium-result/#comments</comments>
		<pubDate>Sat, 02 Jun 2007 13:32:59 +0000</pubDate>
		<dc:creator>dapo</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[CPD]]></category>
		<category><![CDATA[Medical]]></category>
		<category><![CDATA[Talking point]]></category>
		<category><![CDATA[potassium]]></category>

		<guid isPermaLink="false">http://blog.biomedicalscience.org.uk/2007/06/02/unusual-potassium-result/</guid>
		<description><![CDATA[The laboratory I work in has recently seen a very unusual potassium result. During the afternoon, one of our consultants came across a high potassium result, 13.4, that he suspected might be an EDTA contaminated sample. A potassium of 13.4 mmol/L is grossly abnormal and incompatible with life. We were certain the result did not [...]]]></description>
			<content:encoded><![CDATA[<p>The laboratory I work in has recently seen a very unusual potassium result.  During the afternoon, one of our consultants came across a high potassium result, 13.4, that he suspected might be an EDTA contaminated sample.</p>
<p><span id="more-36"></span></p>
<p>A potassium of 13.4 mmol/L is grossly abnormal and incompatible with life.  We were certain the result did not reflect what was happening within the patient but we were at a loss to explain the actual cause of the elevated potassium.</p>
<p>There are three common causes of falsely elevated potassium.</p>
<ul>
<li>Delay in centrifugation</li>
<li>heamolysis</li>
<li>EDTA contamination</li>
</ul>
<p>Centrifugation allows the serum or plasma to be seperated from the cells within blood.  Some sample tubes contain a gel material that actually forms a physical barrier during the centrifugation process.  Delaying centrifugation means that the serum or plasma is in contact with the cells for a greater length of time.</p>
<p>Once the blood sample is collected, the cells within the sample only have a finite amount of resources to use.  When the cells were freely circulating around the body, they had easy access to resources like glucose and oxygen.  As time goes by, some of the cells can&#8217;t cope with the conditions and start to die.  This process results in the cells lysing releases their contents or become leaky allowing some of their contents to leave e.g. potassium. Lysis of red blood cells releases large concentrations of lactate dehydrogenase, phosphate and potassium.  This is why a delay in centrifugation causes an increase potassium, it&#8217;s due to the red blood cells releasing potassium.</p>
<p>The date on the sample indicated that there was no significant delay in centrifugation.  This suggested another cause of the elevation.  The sample was not heamolysed so EDTA contamination was considered as the likely cause.  A calcium was added to the sample and put onto the analyser.  The result for the calcium was 2.4 mmol/L.  Thus rulling EDTA contaimination out.</p>
<p>The results did not fit the picture.  A potassium of 13 mmol/L is incompatible with life so we can rule out the result as being genuine.  Another possible cause of problems is contamination with a tube for glucose collection.  These sample contain a source of potassium.  This was ruled out as the patient didn&#8217;t have a glucose sample collected and the potassium result was not high enough.</p>
<p>Our consultant investigated the patient further and contacted the person who collected the sample.  The sample was collected the day before with the intention of dropping the sample into the laboratory on their way home.  When the individual got home and found the sample, the sample was placed in their fridge overnight.  This increased the amount of potassium released from the red blood cells.  When the sample was taken out from the fridge the next day, the individual noticed they had forgotten to write the date on the form and sample and wrote todays date, not the date of collection.  Mystery solved!</p>
<p>An unusual source of elevated potassium is due to the clotting process.  In some individuals, the clotting process can cause potassium to be released giving the impression of an elevated potassium concentration.  One way of determining this is to collect serum and plasma samples for analysis.  The serum sample should have a significantly higher potassium concentration compared to the plasma sample because of the clotting process.  Plasma samples are prevented from the clotting by the use of heparin in the sample.</p>
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		</item>
		<item>
		<title>A GP&#8217;s perspective on eGFR</title>
		<link>http://blog.biomedicalscience.org.uk/2007/03/07/a-gps-perspective-on-egfr/</link>
		<comments>http://blog.biomedicalscience.org.uk/2007/03/07/a-gps-perspective-on-egfr/#comments</comments>
		<pubDate>Wed, 07 Mar 2007 20:29:19 +0000</pubDate>
		<dc:creator>dapo</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[Medical]]></category>
		<category><![CDATA[Talking point]]></category>

		<guid isPermaLink="false">http://blog.biomedicalscience.org.uk/archives/27</guid>
		<description><![CDATA[http://www.ft.com/cms/s/91a88fe6-c92b-11db-9f7b-000b5df10621.html]]></description>
			<content:encoded><![CDATA[<p><a href="http://www.ft.com/cms/s/91a88fe6-c92b-11db-9f7b-000b5df10621.html">http://www.ft.com/cms/s/91a88fe6-c92b-11db-9f7b-000b5df10621.html</a></p>
]]></content:encoded>
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		</item>
		<item>
		<title>The future?</title>
		<link>http://blog.biomedicalscience.org.uk/2007/01/16/the-future/</link>
		<comments>http://blog.biomedicalscience.org.uk/2007/01/16/the-future/#comments</comments>
		<pubDate>Tue, 16 Jan 2007 17:11:13 +0000</pubDate>
		<dc:creator>dapo</dc:creator>
				<category><![CDATA[Chemistry]]></category>
		<category><![CDATA[Roche]]></category>

		<guid isPermaLink="false">http://blog.biomedicalscience.org.uk/?p=10</guid>
		<description><![CDATA[I attended a lecture at University of Westminster dealing with micro array technology with regards to Chemical Pathology in 1999 or 2000. At the time it seemed very promising. The lecture was performed by an academic but the underlying technology implementation was from Roche. It seems that this approach was subsequently mothballed. At the time, [...]]]></description>
			<content:encoded><![CDATA[<p>I attended a lecture at University of Westminster dealing with micro array technology with regards to Chemical Pathology in 1999 or 2000. At the time it seemed very promising. The lecture was performed by an academic but the underlying technology implementation was from Roche. It seems that this approach was subsequently mothballed. At the time, I heard it was for commercial reasons, as Roche were pushing a different immunoanalyser.</p>
<p>It now seems that Roche are back in the game&#8230;</p>
<p><a href="http://www.roche.com/home/media/med_div/med_dia/med_dia_2007/med_dia_2007-01-15.htm">http://www.roche.com/home/media/med_div/med_dia/med_dia_2007/med_dia_2007-01-15.htm</a></p>
<p>I believe this reference will provide some background:</p>
<p><font color="#000000">Ekins, R. (1998) Ligand assays: from electrophoresis to miniaturized microarrays.</font><font color="#000000"><em> Clin Chem,</em></font><font color="#000000"> 44:9, p. 2015-2030</font></p>
<p>Or <a href="http://www.clinchem.org/cgi/content/full/44/9/2015">this</a> link.</p>
<p>http://www.clinchem.org/cgi/content/full/44/9/2015</p>
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		<item>
		<title>Workload returns to normal&#8230;&#8230;.</title>
		<link>http://blog.biomedicalscience.org.uk/2007/01/12/workload-returns-to-normal/</link>
		<comments>http://blog.biomedicalscience.org.uk/2007/01/12/workload-returns-to-normal/#comments</comments>
		<pubDate>Fri, 12 Jan 2007 19:39:30 +0000</pubDate>
		<dc:creator>dapo</dc:creator>
				<category><![CDATA[Chemistry]]></category>

		<guid isPermaLink="false">http://blog.biomedicalscience.org.uk/?p=5</guid>
		<description><![CDATA[The Christmas  drop in workload is well and truly over.  This week has been really busy.  No surprise that the workload has returned,  you just hope that it might be delayed for just a bit longer.  It didn&#8217;t help that the lamp on out high throughput analyser required changing in the afternoon.  A process that [...]]]></description>
			<content:encoded><![CDATA[<p>The Christmas  drop in workload is well and truly over.  This week has been really busy.  No surprise that the workload has returned,  you just hope that it might be delayed for just a bit longer.  It didn&#8217;t help that the lamp on out high throughput analyser required changing in the afternoon.  A process that takes at least 90 minutes.</p>
<p>After all that hard work, I still had to face the poor weather we are currently getting.  Bring on the summer!</p>
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		</item>
		<item>
		<title>Lab Rat or Button Monkey?</title>
		<link>http://blog.biomedicalscience.org.uk/2007/01/07/lab-rat-or-button-monkey/</link>
		<comments>http://blog.biomedicalscience.org.uk/2007/01/07/lab-rat-or-button-monkey/#comments</comments>
		<pubDate>Sun, 07 Jan 2007 17:14:22 +0000</pubDate>
		<dc:creator>dapo</dc:creator>
				<category><![CDATA[Chemistry]]></category>

		<guid isPermaLink="false">http://blog.biomedicalscience.org.uk/?p=3</guid>
		<description><![CDATA[Working in a pathology department in the NHS, do you see yourself as a Lab Rat or a Button Monkey?]]></description>
			<content:encoded><![CDATA[<p>Working in a pathology department in the NHS, do you see yourself as a Lab Rat or a Button Monkey?</p>
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